useDetect = false
numThreads = 47
DiaNN = D:\Public\Snigdha\Documents\FragPipe-19.0\fragpipe\tools\diann\1.8.2_beta_8\win\DiaNN.exe
renamePin = 1
useRT = true
useSpectra = true
fragger = D:\Public\Snigdha\Lung_macro\DIA\DIA_MZML\DIA_DD_MZML\fragger_dia.params
deletePreds = false
mzmlDirectory = D:\Public\Snigdha\Lung_macro\DIA\DIA_MZML\DIA_DD_MZML 
pinPepXMLDirectory = A\1219705_PPI_Struc_Macrophages_C_DD_DIA_6_19Jan24_Cicero_BEHCoA-24-01-13.pin A\1219601_PPI_Struc_Macrophages_A_DD_DIA_4_19Jan24_Cicero_BEHCoA-24-01-13.pin A\1219653_PPI_Struc_Macrophages_B_DD_DIA_5_19Jan24_Cicero_BEHCoA-24-01-13.pin
useMultipleCorrelatedFeatures = false